Introduction to computational neuroscience

Master course, The Abdus Salam International Centre for Theoretical Physics, ICTP, 2024

Introduction to computational neuroscience

I gave this 20 hours course from 2020 to 2024 in the Postgraduate Diploma Programme in Quantitative Life Sciences at ICTP as an independent senior postdoc.

I also gave this course in the 2024-25 academic year as a visiting professor. The course was supplemented by a section on Evolution on Neural Systems by Alessandro Treves from SISSA.

Main topics

  • Neural dynamics
    • Biophysics of neural excitability (Hodgkin-Huxley model)
    • Stochastic models of spike generation
    • Generalized IF models
    • Mean-field analysis of population dynamics
  • Neural coding
    • Analysis of spike trains
    • Neural encoding models and GLMs
  • Methods in computational neuroscience
    • Linear and nonlinear dimensionality reduction
    • Boltzman machines
  • Neural computation
    • Learning algorithms for recurrent neural networks (Reservoir computing, FORCE, BPTT)

Books